PMM-12548 Add json tags for PMM purposes. (#951)

* PMM-12548 Add json tags for PMM purposes.

* PMM-12548 Response length json tag.

.github/workflows/toolkit.yml

@@ -27,7 +27,7 @@ jobs:
     - name: Build the Docker image
       run: echo "FROM oraclelinux:9-slim" > Dockerfile; echo "RUN microdnf -y update" >> Dockerfile; echo "COPY bin/* /usr/bin/" >> Dockerfile; docker build . --file Dockerfile --tag percona-toolkit:${{ github.sha }}
     - name: Run Trivy vulnerability scanner
-      uses: aquasecurity/trivy-action@0.30.0
+      uses: aquasecurity/trivy-action@0.31.0
       with:
           image-ref: 'percona-toolkit:${{ github.sha }}'
           format: 'table'

.typos.toml

@@ -39,6 +39,9 @@ extend-ignore-re = [
 "END_ND_TOOLTIPS" = "END_ND_TOOLTIPS"
 "EXPLAINed" = "EXPLAINed"
 "FH_ND_FILE" = "FH_ND_FILE"
+"GTI" = "GTI"
+"GTID" = "GTID"
+"GTIDs" = "GTIDs"
 "INSERTs" = "INSERTs"
 "IST" = "IST"
 "istError" = "istError"

Changelog

@@ -1,5 +1,21 @@
 Changelog for Percona Toolkit
 
+v3.7.0-2 released 2025-05-14
+
+This release addresses multiple security vulnerabilities reported in Percona Toolkit version 3.7.0, including issues related to the `libxml2` component (CVE-2024-56171, CVE-2025-24928), `openssl` (CVE-2024-12797), and `krb5` (CVE-2022-37967).
+
+* Fixed bug PT-2442: percona-toolkit:latest Vulnerability [CVE-2024-56171 CVE-2024-12797 CVE-2022-37967 CVE-2025-24928]
+* Fixed bug PT-2375: pt-table-sync does not work with generated columns (Thanks to Henning Pöttker for the contribution)
+* Fixed bug PT-2400: pt-table-checksum reports the error for warning code 4164
+* Fixed bug PT-2377: pt-table-sync does not handle utf8 strings in JSON columns correctly (Thanks to Henning Pöttker for the contribution)
+* Fixed bug PT-2378: pt-table-sync does print floating point numbers in SQL statements with insufficient precision (Thanks to Henning Pöttker for the contribution)
+* Fixed bug PT-2389: pt-online-schema-change resume functionality doesn't work with ADD/DROP column (Thanks to Perry Harrington for the contribution)
+* Fixed bug PT-2410: pt-archiver brokes when using output-format=csv and has null values (Thanks to Roberto de Bem for the contribution)
+* Fixed bug PT-2422: pt-online-schema-change race overwrites new_table_name (Thanks to Perry Harrington for the contribution)
+* Fixed bug PT-2407: pt-online-schema-change exit status(return code) is 0 even if it does NOT succeed
+* Fixed bug PT-2355: pt-online-schema-change should not resume a job with empty boundaries
+* Fixed bug PT-1577: pt-secure-collect, replace pt-secure-data in Usage section
+
 v3.7.0 released 2024-12-23
 
 * Feature PT-2340: Support MySQL 8.4
@@ -18,8 +34,7 @@ v3.6.0 released 2024-06-12
 * Improvement PR-160:  added support for operf if present, and if CMD_OPCONTROL is not set (Thanks to Fernando Ipar for the contribution)
 * Improvement PR-140:  Add CPU cache configuration info to pt-summary (Thanks to Alexey Kopytov for the contribution)
 * Improvement PR-765:  pt-galera-log-explainer: improvements from feedbacks (Thanks Yoann La Cancellera for the contribution)
-* Improvement PT-2233: pt-k8s-debug-collector needs psql in the host node
-(Thanks to Jobin Augustine for the contribution)
+* Improvement PT-2233: pt-k8s-debug-collector needs psql in the host node (Thanks to Jobin Augustine for the contribution)
 * Improvement PR-772:  pt-galera-log-explainer: add custom regexes parameter (Thanks Yoann La Cancellera for the contribution)
 * Improvement PT-2301: pt-galera-log-explainer: whois redesign (Thanks Yoann La Cancellera for the contribution)
 * Improvement PT-2190: pt-show-grants should use print_identified_with_as_hex

Makefile.PL

@@ -11,7 +11,7 @@ MAKE_GOTOOLS
 
 WriteMakefile(
     NAME      => 'Percona::Toolkit',
-    VERSION   => '3.7.0',
+    VERSION   => '3.7.0-2',
     EXE_FILES => [
       map {
          (my $name = $_) =~ s/^bin.//;

bin/pt-archiver

@@ -5761,7 +5761,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-config-diff

@@ -3063,11 +3063,24 @@ sub _parse_config {
    }
    elsif ( my $dbh = $args{dbh} ) {
       $config_data{format} = $args{format} || 'show_variables';
+      my $mysql_version = _get_version($dbh);
       my $sql = "SHOW /*!40103 GLOBAL*/ VARIABLES";
       PTDEBUG && _d($dbh, $sql);
       my $rows = $dbh->selectall_arrayref($sql);
-      $config_data{vars} = { map { @$_ } @$rows };
-      $config_data{mysql_version} = _get_version($dbh);
+      $config_data{vars} = {
+         map {
+            my ($variable, $value) = @$_;
+            if ( length($value) == 1024 && $mysql_version ge '5.7.0' ) {
+               my $var_sql = "SELECT \@\@global.$variable";
+               PTDEBUG && _d($dbh, $var_sql);
+               my $var_sth = $dbh->prepare($var_sql);
+               $var_sth->execute();
+               ($value) = $var_sth->fetchrow_array();
+            }
+            $variable => $value
+         } @$rows
+      };
+      $config_data{mysql_version} = $mysql_version;
    }
    else {
       die "Unknown config source";
@@ -4934,7 +4947,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-deadlock-logger

@@ -3984,7 +3984,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-diskstats

@@ -4431,7 +4431,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-duplicate-key-checker

@@ -4548,7 +4548,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-find

@@ -3310,7 +3310,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-fk-error-logger

@@ -3491,7 +3491,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-heartbeat

@@ -5352,7 +5352,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-index-usage

@@ -5947,7 +5947,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-kill

@@ -6575,7 +6575,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-online-schema-change

@@ -7858,7 +7858,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-query-digest

@@ -12792,7 +12792,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,
@@ -16258,12 +16258,12 @@ type: string; default: report
 How to format and print the query analysis results.  Accepted values are:
 
    VALUE          FORMAT
-   =======        ===============================
+   =======        ======================================
    report         Standard query analysis report
    slowlog        MySQL slow log
    json           JSON, one array per query class
    json-anon      JSON without example queries
-   secure-slowlog JSON without example queries
+   secure-slowlog MySQL slow log with anonymized queries 
 
 The entire C<report> output can be disabled by specifying C<--no-report>
 (see L<"--[no]report">), and its sections can be disabled or rearranged

bin/pt-replica-restart

@@ -4656,7 +4656,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-slave-delay

@@ -3790,7 +3790,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-table-checksum

@@ -899,7 +899,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,
@@ -9082,11 +9082,24 @@ sub _parse_config {
    }
    elsif ( my $dbh = $args{dbh} ) {
       $config_data{format} = $args{format} || 'show_variables';
+      my $mysql_version = _get_version($dbh);
       my $sql = "SHOW /*!40103 GLOBAL*/ VARIABLES";
       PTDEBUG && _d($dbh, $sql);
       my $rows = $dbh->selectall_arrayref($sql);
-      $config_data{vars} = { map { @$_ } @$rows };
-      $config_data{mysql_version} = _get_version($dbh);
+      $config_data{vars} = {
+         map {
+            my ($variable, $value) = @$_;
+            if ( length($value) == 1024 && $mysql_version ge '5.7.0' ) {
+               my $var_sql = "SELECT \@\@global.$variable";
+               PTDEBUG && _d($dbh, $var_sql);
+               my $var_sth = $dbh->prepare($var_sql);
+               $var_sth->execute();
+               ($value) = $var_sth->fetchrow_array();
+            }
+            $variable => $value
+         } @$rows
+      };
+      $config_data{mysql_version} = $mysql_version;
    }
    else {
       die "Unknown config source";
@@ -10272,11 +10285,11 @@ sub main {
 
 
    if ( $o->get('truncate-replicate-table') && $o->get('resume') ) {
-       die "--resume and truncate-replicate-table are mutually exclusive";
+      die "--resume and truncate-replicate-table are mutually exclusive";
    }
 
    if ( $o->get('truncate-replicate-table') && !$o->get('empty-replicate-table') ) {
-       die "--resume and --no-empty-replicate-table are mutually exclusive";
+      die "--truncate-replicate-table and --no-empty-replicate-table are mutually exclusive";
    }
 
    # ########################################################################

bin/pt-table-sync

@@ -9604,7 +9604,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-upgrade

@@ -4297,7 +4297,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

bin/pt-variable-advisor

@@ -4729,7 +4729,7 @@ sub version_check {
       PTDEBUG && _d('Version check failed:', $EVAL_ERROR);
    }
 
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          update_check_times(
             instances => $instances_to_check,

config/scripts/pt_builder.sh

@@ -582,8 +582,8 @@ OS_NAME=
 ARCH=
 OS=
 INSTALL=0
-RPM_RELEASE=1
-DEB_RELEASE=1
+RPM_RELEASE=2
+DEB_RELEASE=2
 REVISION=0
 GIT_BRANCH=${GIT_BRANCH}
 GIT_REPO=https://github.com/percona/percona-toolkit.git

config/sphinx-build/conf.py

@@ -41,7 +41,7 @@ master_doc = 'index'
 
 # General information about the project.
 project = u'Percona Toolkit'
-copyright = u'2024, Percona LLC and/or its affiliates'
+copyright = u'2025, Percona LLC and/or its affiliates'
 
 # The version info for the project you're documenting, acts as replacement for
 # |version| and |release|, also used in various other places throughout the
@@ -50,7 +50,7 @@ copyright = u'2024, Percona LLC and/or its affiliates'
 # The short X.Y version.
 version = '3.7'
 # The full version, including alpha/beta/rc tags.
-release = '3.7.0'
+release = '3.7.0-2'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.
@@ -202,7 +202,7 @@ htmlhelp_basename = 'PerconaToolkitdoc'
 # (source start file, target name, title, author, documentclass [howto/manual]).
 latex_documents = [
   ('index', 'PerconaToolkit.tex', u'Percona Toolkit Documentation',
-   u'2024, Percona LLC and/or its affiliates', 'manual'),
+   u'2025, Percona LLC and/or its affiliates', 'manual'),
 ]
 
 # The name of an image file (relative to this directory) to place at the top of
@@ -236,5 +236,5 @@ latex_toplevel_sectioning = 'part'
 # (source start file, name, description, authors, manual section).
 man_pages = [
     ('index', 'perconatoolkit', u'Percona Toolkit Documentation',
-     [u'2024, Percona LLC and/or its affiliates'], 1)
+     [u'2025, Percona LLC and/or its affiliates'], 1)
 ]

docs/release_notes.rst

@@ -1,6 +1,26 @@
 Release Notes
 ***************
 
+v3.7.0-2 released 2025-05-14
+==============================
+
+This release addresses multiple security vulnerabilities reported in Percona Toolkit version 3.7.0, including issues related to the `libxml2` component (CVE-2024-56171, CVE-2025-24928), `openssl` (CVE-2024-12797), and `krb5` (CVE-2022-37967).
+
+Bug Fixed
+------------
+
+* :jirabug:`PT-2442`: percona-toolkit:latest Vulnerability [CVE-2024-56171 CVE-2024-12797 CVE-2022-37967 CVE-2025-24928]
+* :jirabug:`PT-2375`: pt-table-sync does not work with generated columns (Thanks to Henning Pöttker for the contribution)
+* :jirabug:`PT-2400`: pt-table-checksum reports the error for warning code 4164
+* :jirabug:`PT-2377`: pt-table-sync does not handle utf8 strings in JSON columns correctly (Thanks to Henning Pöttker for the contribution)
+* :jirabug:`PT-2378`: pt-table-sync does print floating point numbers in SQL statements with insufficient precision (Thanks to Henning Pöttker for the contribution)
+* :jirabug:`PT-2389`: pt-online-schema-change resume functionality doesn't work with ADD/DROP column (Thanks to Perry Harrington for the contribution)
+* :jirabug:`PT-2410`: pt-archiver brokes when using output-format=csv and has null values (Thanks to Roberto de Bem for the contribution)
+* :jirabug:`PT-2422`: pt-online-schema-change race overwrites new_table_name (Thanks to Perry Harrington for the contribution)
+* :jirabug:`PT-2407`: pt-online-schema-change exit status(return code) is 0 even if it does NOT succeed
+* :jirabug:`PT-2355`: pt-online-schema-change should not resume a job with empty boundaries
+* :jirabug:`PT-1577`: pt-secure-collect, replace pt-secure-data in Usage section
+
 v3.7.0 released 2024-12-23
 ==============================
 

go.mod

@@ -1,6 +1,6 @@
 module github.com/percona/percona-toolkit
 
-go 1.23.4
+go 1.24.0
 
 toolchain go1.24.1
 
@@ -9,7 +9,7 @@ require (
 	github.com/Ladicle/tabwriter v1.0.0
 	github.com/Masterminds/semver v1.5.0
 	github.com/alecthomas/kingpin v2.2.6+incompatible
-	github.com/alecthomas/kong v1.9.0
+	github.com/alecthomas/kong v1.11.0
 	github.com/davecgh/go-spew v1.1.2-0.20180830191138-d8f796af33cc
 	github.com/go-ini/ini v1.67.0
 	github.com/golang/mock v1.6.0
@@ -28,12 +28,12 @@ require (
 	github.com/sirupsen/logrus v1.9.3
 	github.com/stretchr/testify v1.10.0
 	github.com/xlab/treeprint v1.2.0
-	go.mongodb.org/mongo-driver v1.17.3
-	golang.org/x/crypto v0.36.0
+	go.mongodb.org/mongo-driver v1.17.4
+	golang.org/x/crypto v0.39.0
 	golang.org/x/exp v0.0.0-20230321023759-10a507213a29
 	gopkg.in/mgo.v2 v2.0.0-20190816093944-a6b53ec6cb22
 	gopkg.in/yaml.v2 v2.4.0
-	k8s.io/api v0.32.3
+	k8s.io/api v0.33.1
 	k8s.io/utils v0.0.0-20241104100929-3ea5e8cea738
 )
 
@@ -45,7 +45,6 @@ require (
 	github.com/go-ole/go-ole v1.2.6 // indirect
 	github.com/gogo/protobuf v1.3.2 // indirect
 	github.com/golang/snappy v0.0.4 // indirect
-	github.com/google/gofuzz v1.2.0 // indirect
 	github.com/json-iterator/go v1.1.12 // indirect
 	github.com/klauspost/compress v1.16.7 // indirect
 	github.com/kr/text v0.2.0 // indirect
@@ -62,16 +61,17 @@ require (
 	github.com/xdg-go/stringprep v1.0.4 // indirect
 	github.com/youmark/pkcs8 v0.0.0-20240726163527-a2c0da244d78 // indirect
 	github.com/yusufpapurcu/wmi v1.2.2 // indirect
-	golang.org/x/net v0.36.0 // indirect
-	golang.org/x/sync v0.12.0 // indirect
-	golang.org/x/sys v0.31.0 // indirect
-	golang.org/x/term v0.30.0 // indirect
-	golang.org/x/text v0.23.0 // indirect
+	golang.org/x/net v0.38.0 // indirect
+	golang.org/x/sync v0.15.0 // indirect
+	golang.org/x/sys v0.33.0 // indirect
+	golang.org/x/term v0.32.0 // indirect
+	golang.org/x/text v0.26.0 // indirect
 	gopkg.in/inf.v0 v0.9.1 // indirect
 	gopkg.in/yaml.v3 v3.0.1 // indirect
-	k8s.io/apimachinery v0.32.3 // indirect
+	k8s.io/apimachinery v0.33.1 // indirect
 	k8s.io/klog/v2 v2.130.1 // indirect
 	sigs.k8s.io/json v0.0.0-20241010143419-9aa6b5e7a4b3 // indirect
-	sigs.k8s.io/structured-merge-diff/v4 v4.4.2 // indirect
+	sigs.k8s.io/randfill v1.0.0 // indirect
+	sigs.k8s.io/structured-merge-diff/v4 v4.6.0 // indirect
 	sigs.k8s.io/yaml v1.4.0 // indirect
 )

go.sum

@@ -8,8 +8,8 @@ github.com/alecthomas/assert/v2 v2.11.0 h1:2Q9r3ki8+JYXvGsDyBXwH3LcJ+WK5D0gc5E8v
 github.com/alecthomas/assert/v2 v2.11.0/go.mod h1:Bze95FyfUr7x34QZrjL+XP+0qgp/zg8yS+TtBj1WA3k=
 github.com/alecthomas/kingpin v2.2.6+incompatible h1:5svnBTFgJjZvGKyYBtMB0+m5wvrbUHiqye8wRJMlnYI=
 github.com/alecthomas/kingpin v2.2.6+incompatible/go.mod h1:59OFYbFVLKQKq+mqrL6Rw5bR0c3ACQaawgXx0QYndlE=
-github.com/alecthomas/kong v1.9.0 h1:Wgg0ll5Ys7xDnpgYBuBn/wPeLGAuK0NvYmEcisJgrIs=
-github.com/alecthomas/kong v1.9.0/go.mod h1:p2vqieVMeTAnaC83txKtXe8FLke2X07aruPWXyMPQrU=
+github.com/alecthomas/kong v1.11.0 h1:y++1gI7jf8O7G7l4LZo5ASFhrhJvzc+WgF/arranEmM=
+github.com/alecthomas/kong v1.11.0/go.mod h1:p2vqieVMeTAnaC83txKtXe8FLke2X07aruPWXyMPQrU=
 github.com/alecthomas/repr v0.4.0 h1:GhI2A8MACjfegCPVq9f1FLvIBS+DrQ2KQBFZP1iFzXc=
 github.com/alecthomas/repr v0.4.0/go.mod h1:Fr0507jx4eOXV7AlPV6AVZLYrLIuIeSOWtW57eE/O/4=
 github.com/alecthomas/template v0.0.0-20190718012654-fb15b899a751 h1:JYp7IbQjafoB+tBA3gMyHYHrpOtNuDiK/uB5uXxq5wM=
@@ -41,8 +41,6 @@ github.com/google/go-cmp v0.5.9/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeN
 github.com/google/go-cmp v0.7.0 h1:wk8382ETsv4JYUZwIsn6YpYiWiBsYLSJiTsyBybVuN8=
 github.com/google/go-cmp v0.7.0/go.mod h1:pXiqmnSA92OHEEa9HXL2W4E7lf9JzCmGVUdgjX3N/iU=
 github.com/google/gofuzz v1.0.0/go.mod h1:dBl0BpW6vV/+mYPU4Po3pmUjxk6FQPldtuIdl/M65Eg=
-github.com/google/gofuzz v1.2.0 h1:xRy4A+RhZaiKjJ1bPfwQ8sedCA+YS2YcCHW6ec7JMi0=
-github.com/google/gofuzz v1.2.0/go.mod h1:dBl0BpW6vV/+mYPU4Po3pmUjxk6FQPldtuIdl/M65Eg=
 github.com/google/uuid v1.6.0 h1:NIvaJDMOsjHA8n1jAhLSgzrAzy1Hgr+hNrb57e+94F0=
 github.com/google/uuid v1.6.0/go.mod h1:TIyPZe4MgqvfeYDBFedMoGGpEw/LqOeaOT+nhxU+yHo=
 github.com/hashicorp/go-version v1.7.0 h1:5tqGy27NaOTB8yJKUZELlFAS/LTKJkrmONwQKeRZfjY=
@@ -86,8 +84,8 @@ github.com/pkg/errors v0.9.1/go.mod h1:bwawxfHBFNV+L2hUp1rHADufV3IMtnDRdf1r5NINE
 github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
 github.com/pmezard/go-difflib v1.0.1-0.20181226105442-5d4384ee4fb2 h1:Jamvg5psRIccs7FGNTlIRMkT8wgtp5eCXdBlqhYGL6U=
 github.com/pmezard/go-difflib v1.0.1-0.20181226105442-5d4384ee4fb2/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
-github.com/rogpeppe/go-internal v1.12.0 h1:exVL4IDcn6na9z1rAb56Vxr+CgyK3nn3O+epU5NdKM8=
-github.com/rogpeppe/go-internal v1.12.0/go.mod h1:E+RYuTGaKKdloAfM02xzb0FW3Paa99yedzYV+kq4uf4=
+github.com/rogpeppe/go-internal v1.13.1 h1:KvO1DLK/DRN07sQ1LQKScxyZJuNnedQ5/wKSR38lUII=
+github.com/rogpeppe/go-internal v1.13.1/go.mod h1:uMEvuHeurkdAXX61udpOXGD/AzZDWNMNyH2VO9fmH0o=
 github.com/rs/xid v1.6.0/go.mod h1:7XoLgs4eV+QndskICGsho+ADou8ySMSjJKDIan90Nz0=
 github.com/rs/zerolog v1.34.0 h1:k43nTLIwcTVQAncfCw4KZ2VY6ukYoZaBPNOE8txlOeY=
 github.com/rs/zerolog v1.34.0/go.mod h1:bJsvje4Z08ROH4Nhs5iH600c3IkWhwp44iRc54W6wYQ=
@@ -125,14 +123,14 @@ github.com/yuin/goldmark v1.3.5/go.mod h1:mwnBkeHKe2W/ZEtQ+71ViKU8L12m81fl3OWwC1
 github.com/yuin/goldmark v1.4.13/go.mod h1:6yULJ656Px+3vBD8DxQVa3kxgyrAnzto9xy5taEt/CY=
 github.com/yusufpapurcu/wmi v1.2.2 h1:KBNDSne4vP5mbSWnJbO+51IMOXJB67QiYCSBrubbPRg=
 github.com/yusufpapurcu/wmi v1.2.2/go.mod h1:SBZ9tNy3G9/m5Oi98Zks0QjeHVDvuK0qfxQmPyzfmi0=
-go.mongodb.org/mongo-driver v1.17.3 h1:TQyXhnsWfWtgAhMtOgtYHMTkZIfBTpMTsMnd9ZBeHxQ=
-go.mongodb.org/mongo-driver v1.17.3/go.mod h1:Hy04i7O2kC4RS06ZrhPRqj/u4DTYkFDAAccj+rVKqgQ=
+go.mongodb.org/mongo-driver v1.17.4 h1:jUorfmVzljjr0FLzYQsGP8cgN/qzzxlY9Vh0C9KFXVw=
+go.mongodb.org/mongo-driver v1.17.4/go.mod h1:Hy04i7O2kC4RS06ZrhPRqj/u4DTYkFDAAccj+rVKqgQ=
 golang.org/x/crypto v0.0.0-20190308221718-c2843e01d9a2/go.mod h1:djNgcEr1/C05ACkg1iLfiJU5Ep61QUkGW8qpdssI0+w=
 golang.org/x/crypto v0.0.0-20191011191535-87dc89f01550/go.mod h1:yigFU9vqHzYiE8UmvKecakEJjdnWj3jj499lnFckfCI=
 golang.org/x/crypto v0.0.0-20200622213623-75b288015ac9/go.mod h1:LzIPMQfyMNhhGPhUkYOs5KpL4U8rLKemX1yGLhDgUto=
 golang.org/x/crypto v0.0.0-20210921155107-089bfa567519/go.mod h1:GvvjBRRGRdwPK5ydBHafDWAxML/pGHZbMvKqRZ5+Abc=
-golang.org/x/crypto v0.36.0 h1:AnAEvhDddvBdpY+uR+MyHmuZzzNqXSe/GvuDeob5L34=
-golang.org/x/crypto v0.36.0/go.mod h1:Y4J0ReaxCR1IMaabaSMugxJES1EpwhBHhv2bDHklZvc=
+golang.org/x/crypto v0.39.0 h1:SHs+kF4LP+f+p14esP5jAoDpHU8Gu/v9lFRK6IT5imM=
+golang.org/x/crypto v0.39.0/go.mod h1:L+Xg3Wf6HoL4Bn4238Z6ft6KfEpN0tJGo53AAPC632U=
 golang.org/x/exp v0.0.0-20230321023759-10a507213a29 h1:ooxPy7fPvB4kwsA2h+iBNHkAbp/4JxTSwCmvdjEYmug=
 golang.org/x/exp v0.0.0-20230321023759-10a507213a29/go.mod h1:CxIveKay+FTh1D0yPZemJVgC/95VzuuOLq5Qi4xnoYc=
 golang.org/x/mod v0.2.0/go.mod h1:s0Qsj1ACt9ePp/hMypM3fl4fZqREWJwdYDEqhRiZZUA=
@@ -146,15 +144,15 @@ golang.org/x/net v0.0.0-20201021035429-f5854403a974/go.mod h1:sp8m0HH+o8qH0wwXwY
 golang.org/x/net v0.0.0-20210226172049-e18ecbb05110/go.mod h1:m0MpNAwzfU5UDzcl9v0D8zg8gWTRqZa9RBIspLL5mdg=
 golang.org/x/net v0.0.0-20210405180319-a5a99cb37ef4/go.mod h1:p54w0d4576C0XHj96bSt6lcn1PtDYWL6XObtHCRCNQM=
 golang.org/x/net v0.0.0-20220722155237-a158d28d115b/go.mod h1:XRhObCWvk6IyKnWLug+ECip1KBveYUHfp+8e9klMJ9c=
-golang.org/x/net v0.36.0 h1:vWF2fRbw4qslQsQzgFqZff+BItCvGFQqKzKIzx1rmoA=
-golang.org/x/net v0.36.0/go.mod h1:bFmbeoIPfrw4sMHNhb4J9f6+tPziuGjq7Jk/38fxi1I=
+golang.org/x/net v0.38.0 h1:vRMAPTMaeGqVhG5QyLJHqNDwecKTomGeqbnfZyKlBI8=
+golang.org/x/net v0.38.0/go.mod h1:ivrbrMbzFq5J41QOQh0siUuly180yBYtLp+CKbEaFx8=
 golang.org/x/sync v0.0.0-20190423024810-112230192c58/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20190911185100-cd5d95a43a6e/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20201020160332-67f06af15bc9/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20210220032951-036812b2e83c/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20220722155255-886fb9371eb4/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
-golang.org/x/sync v0.12.0 h1:MHc5BpPuC30uJk597Ri8TV3CNZcTLu6B6z4lJy+g6Jw=
-golang.org/x/sync v0.12.0/go.mod h1:1dzgHSNfp02xaA81J2MS99Qcpr2w7fw1gpm99rleRqA=
+golang.org/x/sync v0.15.0 h1:KWH3jNZsfyT6xfAfKiz6MRNmd46ByHDYaZ7KSkCtdW8=
+golang.org/x/sync v0.15.0/go.mod h1:1dzgHSNfp02xaA81J2MS99Qcpr2w7fw1gpm99rleRqA=
 golang.org/x/sys v0.0.0-20190215142949-d0b11bdaac8a/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
 golang.org/x/sys v0.0.0-20190412213103-97732733099d/go.mod h1:h1NjWce9XRLGQEsW7wpKNCjG9DtNlClVuFLEZdDNbEs=
 golang.org/x/sys v0.0.0-20190916202348-b4ddaad3f8a3/go.mod h1:h1NjWce9XRLGQEsW7wpKNCjG9DtNlClVuFLEZdDNbEs=
@@ -170,18 +168,18 @@ golang.org/x/sys v0.0.0-20220811171246-fbc7d0a398ab/go.mod h1:oPkhp1MJrh7nUepCBc
 golang.org/x/sys v0.2.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
 golang.org/x/sys v0.6.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
 golang.org/x/sys v0.12.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
-golang.org/x/sys v0.31.0 h1:ioabZlmFYtWhL+TRYpcnNlLwhyxaM9kWTDEmfnprqik=
-golang.org/x/sys v0.31.0/go.mod h1:BJP2sWEmIv4KK5OTEluFJCKSidICx8ciO85XgH3Ak8k=
+golang.org/x/sys v0.33.0 h1:q3i8TbbEz+JRD9ywIRlyRAQbM0qF7hu24q3teo2hbuw=
+golang.org/x/sys v0.33.0/go.mod h1:BJP2sWEmIv4KK5OTEluFJCKSidICx8ciO85XgH3Ak8k=
 golang.org/x/term v0.0.0-20201126162022-7de9c90e9dd1/go.mod h1:bj7SfCRtBDWHUb9snDiAeCFNEtKQo2Wmx5Cou7ajbmo=
 golang.org/x/term v0.0.0-20210927222741-03fcf44c2211/go.mod h1:jbD1KX2456YbFQfuXm/mYQcufACuNUgVhRMnK/tPxf8=
-golang.org/x/term v0.30.0 h1:PQ39fJZ+mfadBm0y5WlL4vlM7Sx1Hgf13sMIY2+QS9Y=
-golang.org/x/term v0.30.0/go.mod h1:NYYFdzHoI5wRh/h5tDMdMqCqPJZEuNqVR5xJLd/n67g=
+golang.org/x/term v0.32.0 h1:DR4lr0TjUs3epypdhTOkMmuF5CDFJ/8pOnbzMZPQ7bg=
+golang.org/x/term v0.32.0/go.mod h1:uZG1FhGx848Sqfsq4/DlJr3xGGsYMu/L5GW4abiaEPQ=
 golang.org/x/text v0.3.0/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
 golang.org/x/text v0.3.3/go.mod h1:5Zoc/QRtKVWzQhOtBMvqHzDpF6irO9z98xDceosuGiQ=
 golang.org/x/text v0.3.7/go.mod h1:u+2+/6zg+i71rQMx5EYifcz6MCKuco9NR6JIITiCfzQ=
 golang.org/x/text v0.3.8/go.mod h1:E6s5w1FMmriuDzIBO73fBruAKo1PCIq6d2Q6DHfQ8WQ=
-golang.org/x/text v0.23.0 h1:D71I7dUrlY+VX0gQShAThNGHFxZ13dGLBHQLVl1mJlY=
-golang.org/x/text v0.23.0/go.mod h1:/BLNzu4aZCJ1+kcD0DNRotWKage4q2rGVAg4o22unh4=
+golang.org/x/text v0.26.0 h1:P42AVeLghgTYr4+xUnTRKDMqpar+PtX7KWuNQL21L8M=
+golang.org/x/text v0.26.0/go.mod h1:QK15LZJUUQVJxhz7wXgxSy/CJaTFjd0G+YLonydOVQA=
 golang.org/x/tools v0.0.0-20180917221912-90fa682c2a6e/go.mod h1:n7NCudcB/nEzxVGmLbDWY5pfWTLqBcC2KZ6jyYvM4mQ=
 golang.org/x/tools v0.0.0-20191119224855-298f0cb1881e/go.mod h1:b+2E5dAYhXwXZwtnZ6UAqBI28+e2cm9otk0dWdXHAEo=
 golang.org/x/tools v0.0.0-20200619180055-7c47624df98f/go.mod h1:EkVYQZoAsY45+roYkvgYkIh4xh/qjgUK9TdY2XT94GE=
@@ -205,17 +203,20 @@ gopkg.in/yaml.v2 v2.4.0/go.mod h1:RDklbk79AGWmwhnvt/jBztapEOGDOx6ZbXqjP6csGnQ=
 gopkg.in/yaml.v3 v3.0.0-20200313102051-9f266ea9e77c/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
 gopkg.in/yaml.v3 v3.0.1 h1:fxVm/GzAzEWqLHuvctI91KS9hhNmmWOoWu0XTYJS7CA=
 gopkg.in/yaml.v3 v3.0.1/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
-k8s.io/api v0.32.3 h1:Hw7KqxRusq+6QSplE3NYG4MBxZw1BZnq4aP4cJVINls=
-k8s.io/api v0.32.3/go.mod h1:2wEDTXADtm/HA7CCMD8D8bK4yuBUptzaRhYcYEEYA3k=
-k8s.io/apimachinery v0.32.3 h1:JmDuDarhDmA/Li7j3aPrwhpNBA94Nvk5zLeOge9HH1U=
-k8s.io/apimachinery v0.32.3/go.mod h1:GpHVgxoKlTxClKcteaeuF1Ul/lDVb74KpZcxcmLDElE=
+k8s.io/api v0.33.1 h1:tA6Cf3bHnLIrUK4IqEgb2v++/GYUtqiu9sRVk3iBXyw=
+k8s.io/api v0.33.1/go.mod h1:87esjTn9DRSRTD4fWMXamiXxJhpOIREjWOSjsW1kEHw=
+k8s.io/apimachinery v0.33.1 h1:mzqXWV8tW9Rw4VeW9rEkqvnxj59k1ezDUl20tFK/oM4=
+k8s.io/apimachinery v0.33.1/go.mod h1:BHW0YOu7n22fFv/JkYOEfkUYNRN0fj0BlvMFWA7b+SM=
 k8s.io/klog/v2 v2.130.1 h1:n9Xl7H1Xvksem4KFG4PYbdQCQxqc/tTUyrgXaOhHSzk=
 k8s.io/klog/v2 v2.130.1/go.mod h1:3Jpz1GvMt720eyJH1ckRHK1EDfpxISzJ7I9OYgaDtPE=
 k8s.io/utils v0.0.0-20241104100929-3ea5e8cea738 h1:M3sRQVHv7vB20Xc2ybTt7ODCeFj6JSWYFzOFnYeS6Ro=
 k8s.io/utils v0.0.0-20241104100929-3ea5e8cea738/go.mod h1:OLgZIPagt7ERELqWJFomSt595RzquPNLL48iOWgYOg0=
 sigs.k8s.io/json v0.0.0-20241010143419-9aa6b5e7a4b3 h1:/Rv+M11QRah1itp8VhT6HoVx1Ray9eB4DBr+K+/sCJ8=
 sigs.k8s.io/json v0.0.0-20241010143419-9aa6b5e7a4b3/go.mod h1:18nIHnGi6636UCz6m8i4DhaJ65T6EruyzmoQqI2BVDo=
-sigs.k8s.io/structured-merge-diff/v4 v4.4.2 h1:MdmvkGuXi/8io6ixD5wud3vOLwc1rj0aNqRlpuvjmwA=
-sigs.k8s.io/structured-merge-diff/v4 v4.4.2/go.mod h1:N8f93tFZh9U6vpxwRArLiikrE5/2tiu1w1AGfACIGE4=
+sigs.k8s.io/randfill v0.0.0-20250304075658-069ef1bbf016/go.mod h1:XeLlZ/jmk4i1HRopwe7/aU3H5n1zNUcX6TM94b3QxOY=
+sigs.k8s.io/randfill v1.0.0 h1:JfjMILfT8A6RbawdsK2JXGBR5AQVfd+9TbzrlneTyrU=
+sigs.k8s.io/randfill v1.0.0/go.mod h1:XeLlZ/jmk4i1HRopwe7/aU3H5n1zNUcX6TM94b3QxOY=
+sigs.k8s.io/structured-merge-diff/v4 v4.6.0 h1:IUA9nvMmnKWcj5jl84xn+T5MnlZKThmUW1TdblaLVAc=
+sigs.k8s.io/structured-merge-diff/v4 v4.6.0/go.mod h1:dDy58f92j70zLsuZVuUX5Wp9vtxXpaZnkPGWeqDfCps=
 sigs.k8s.io/yaml v1.4.0 h1:Mk1wCc2gy/F0THH0TAp1QYyJNzRm2KCLy3o5ASXVI5E=
 sigs.k8s.io/yaml v1.4.0/go.mod h1:Ejl7/uTz7PSA4eKMyQCUTnhZYNmLIl+5c2lQPGR2BPY=

lib/MySQLConfig.pm

@@ -111,11 +111,30 @@ sub _parse_config {
    }
    elsif ( my $dbh = $args{dbh} ) {
       $config_data{format} = $args{format} || 'show_variables';
+      my $mysql_version = _get_version($dbh);
       my $sql = "SHOW /*!40103 GLOBAL*/ VARIABLES";
       PTDEBUG && _d($dbh, $sql);
       my $rows = $dbh->selectall_arrayref($sql);
-      $config_data{vars} = { map { @$_ } @$rows };
-      $config_data{mysql_version} = _get_version($dbh);
+      $config_data{vars} = {
+         map {
+            my ($variable, $value) = @$_;
+            # Starting from MySQL 5.7.6, SHOW VARIABLES retrieves records from
+            # the performance_schema table named GLOBAL_VARIABLES. This table
+            # stores variable values in a VARCHAR(1024) column, meaning longer
+            # values may be truncated. However, the full value can still be
+            # retrieved by accessing the variable with SELECT @@GLOBAL.
+            # https://dev.mysql.com/doc/refman/5.7/en/information-schema-variables-table.html
+            if ( length($value) == 1024 && $mysql_version ge '5.7.0' ) {
+               my $var_sql = "SELECT \@\@global.$variable";
+               PTDEBUG && _d($dbh, $var_sql);
+               my $var_sth = $dbh->prepare($var_sql);
+               $var_sth->execute();
+               ($value) = $var_sth->fetchrow_array();
+            }
+            $variable => $value
+         } @$rows
+      };
+      $config_data{mysql_version} = $mysql_version;
    }
    else {
       die "Unknown config source";

lib/VersionCheck.pm

@@ -181,7 +181,7 @@ sub version_check {
    }
 
    # Always update the vc file, even if the version check fails.
-   if ( @$instances_to_check ) {
+   if ( $instances_to_check and @$instances_to_check ) {
       eval {
          # Update the check time for things we checked.  I.e. if we
          # didn't check it, do _not_ update its time.

requirements-docbuild.txt

@@ -16,6 +16,6 @@ sphinx-tabs
 certifi>=2024.7.4 # not directly required, pinned by Snyk to avoid a vulnerability
 jinja2>=3.1.6 # not directly required, pinned by Snyk to avoid a vulnerability
 pygments>=2.15.0 # not directly required, pinned by Snyk to avoid a vulnerability
-requests>=2.31.0 # not directly required, pinned by Snyk to avoid a vulnerability
-setuptools>=70.0.0 # not directly required, pinned by Snyk to avoid a vulnerability
+requests>=2.32.4 # not directly required, pinned by Snyk to avoid a vulnerability
+setuptools>=78.1.1 # not directly required, pinned by Snyk to avoid a vulnerability
 idna>=3.7 # not directly required, pinned by Snyk to avoid a vulnerability

src/go/mongolib/stats/stats.go

@@ -16,7 +16,6 @@ import (
 
 const (
 	planSummaryCollScan = "COLLSCAN"
-	planSummaryIXScan   = "IXSCAN"
 )
 
 type StatsError struct {
@@ -106,9 +105,8 @@ func (s *Stats) Add(doc proto.SystemProfile) error {
 	if qiac.PlanSummary == planSummaryCollScan {
 		qiac.CollScanCount++
 	}
-	if strings.HasPrefix(qiac.PlanSummary, planSummaryIXScan) {
-		qiac.PlanSummary = planSummaryIXScan
-	}
+
+	qiac.PlanSummary = strings.Split(qiac.PlanSummary, " ")[0]
 
 	qiac.NReturned = append(qiac.NReturned, float64(doc.Nreturned))
 	qiac.QueryTime = append(qiac.QueryTime, float64(doc.Millis))

src/go/pt-k8s-debug-collector/dumper/dumper.go

@@ -28,31 +28,33 @@ type sslSecret struct {
 
 // Dumper struct is for dumping cluster
 type Dumper struct {
-	cmd           string
-	kubeconfig    string
-	resources     []string
-	filePaths     []string
-	fileContainer string
-	namespace     string
-	location      string
-	errors        string
-	mode          int64
-	crType        string
-	forwardport   string
-	sslSecrets    []sslSecret
+	cmd            string
+	kubeconfig     string
+	resources      []string
+	filePaths      []string
+	fileContainer  string
+	namespace      string
+	location       string
+	errors         string
+	mode           int64
+	crType         string
+	forwardport    string
+	sslSecrets     []sslSecret
+	skipPodSummary bool
 }
 
 var resourcesRe = regexp.MustCompile(`(\w+\.(\w+).percona\.com)`)
 
 // New return new Dumper object
-func New(location, namespace, resource string, kubeconfig string, forwardport string) Dumper {
+func New(location, namespace, resource string, kubeconfig string, forwardport string, skipPodSummary bool) Dumper {
 	d := Dumper{
-		cmd:         "kubectl",
-		kubeconfig:  kubeconfig,
-		location:    "cluster-dump",
-		mode:        int64(0o777),
-		namespace:   namespace,
-		forwardport: forwardport,
+		cmd:            "kubectl",
+		kubeconfig:     kubeconfig,
+		location:       "cluster-dump",
+		mode:           int64(0o777),
+		namespace:      namespace,
+		forwardport:    forwardport,
+		skipPodSummary: skipPodSummary,
 	}
 	resources := []string{
 		"pods",
@@ -352,18 +354,20 @@ func (d *Dumper) DumpCluster() error {
 					crName = pod.Labels["app.kubernetes.io/instance"]
 				}
 				// Get summary
-				output, err = d.getPodSummary(resourceType(d.crType), pod.Name, crName, ns.Name)
-				if err != nil {
-					d.logError(err.Error(), d.crType, pod.Name)
-					err = addToArchive(location, d.mode, []byte(err.Error()), tw)
+				if !d.skipPodSummary {
+					output, err = d.getPodSummary(resourceType(d.crType), pod.Name, crName, ns.Name)
 					if err != nil {
-						log.Printf("Error: create summary errors archive for pod %s in namespace %s: %v", pod.Name, ns.Name, err)
-					}
-				} else {
-					err = addToArchive(location, d.mode, output, tw)
-					if err != nil {
-						d.logError(err.Error(), "create summary archive for pod "+pod.Name)
-						log.Printf("Error: create summary  archive for pod %s: %v", pod.Name, err)
+						d.logError(err.Error(), d.crType, pod.Name)
+						err = addToArchive(location, d.mode, []byte(err.Error()), tw)
+						if err != nil {
+							log.Printf("Error: create summary errors archive for pod %s in namespace %s: %v", pod.Name, ns.Name, err)
+						}
+					} else {
+						err = addToArchive(location, d.mode, output, tw)
+						if err != nil {
+							d.logError(err.Error(), "create summary archive for pod "+pod.Name)
+							log.Printf("Error: create summary  archive for pod %s: %v", pod.Name, err)
+						}
 					}
 				}
 

src/go/pt-k8s-debug-collector/main.go

@@ -28,6 +28,7 @@ func main() {
 	kubeconfig := ""
 	forwardport := ""
 	version := false
+	skipPodSummary := false
 
 	flag.StringVar(&namespace, "namespace", "", "Namespace for collecting data. If empty data will be collected from all namespaces")
 	flag.StringVar(&resource, "resource", "auto", "Collect data, specific to the resource. Supported values: pxc, psmdb, pg, pgv2, ps, none, auto")
@@ -35,6 +36,7 @@ func main() {
 	flag.StringVar(&kubeconfig, "kubeconfig", "", "Path to kubeconfig")
 	flag.StringVar(&forwardport, "forwardport", "", "Port to use for  port forwarding")
 	flag.BoolVar(&version, "version", false, "Print version")
+	flag.BoolVar(&skipPodSummary, "skip-pod-summary", false, "Skip pod summary collection")
 	flag.Parse()
 
 	if version {
@@ -50,7 +52,7 @@ func main() {
 		resource += "/" + clusterName
 	}
 
-	d := dumper.New("", namespace, resource, kubeconfig, forwardport)
+	d := dumper.New("", namespace, resource, kubeconfig, forwardport, skipPodSummary)
 	log.Println("Start collecting cluster data")
 
 	err := d.DumpCluster()

src/go/pt-k8s-debug-collector/main_test.go

@@ -365,6 +365,106 @@ func TestSSLResourceOption(t *testing.T) {
 	}
 }
 
+/*
+Tests for option --skip-pod-summary
+*/
+func TestPT_2453(t *testing.T) {
+	testcmd := []string{"sh", "-c", "tar -tf cluster-dump.tar.gz --wildcards '*/summary.txt' 2>/dev/null | wc -l"}
+	tests := []struct {
+		name       string
+		resource   string
+		want       string
+		kubeconfig string
+	}{
+		{
+			name:       "none",
+			resource:   "none",
+			want:       "0",
+			kubeconfig: "",
+		},
+		{
+			name:       "pxc",
+			resource:   "pxc",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PXC"),
+		},
+		{
+			name:       "ps",
+			resource:   "ps",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PS"),
+		},
+		{
+			name:       "psmdb",
+			resource:   "psmdb",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PSMDB"),
+		},
+		{
+			name:       "pg",
+			resource:   "pg",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PG"),
+		},
+		{
+			name:       "pgv2",
+			resource:   "pgv2",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PG2"),
+		},
+		{
+			name:       "auto pxc",
+			resource:   "auto",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PXC"),
+		},
+		{
+			name:       "auto ps",
+			resource:   "auto",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PS"),
+		},
+		{
+			name:       "auto psmdb",
+			resource:   "auto",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PSMDB"),
+		},
+		{
+			name:       "auto pg",
+			resource:   "auto",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PG"),
+		},
+		{
+			name:       "auto pgv2",
+			resource:   "auto",
+			want:       "0",
+			kubeconfig: os.Getenv("KUBECONFIG_PG2"),
+		},
+	}
+
+	for _, test := range tests {
+		cmd := exec.Command("../../../bin/pt-k8s-debug-collector", "--kubeconfig", test.kubeconfig, "--forwardport", os.Getenv("FORWARDPORT"), "--resource", test.resource, "--skip-pod-summary")
+		if err := cmd.Run(); err != nil {
+			t.Errorf("error executing pt-k8s-debug-collector: %s\nCommand: %s", err.Error(), cmd.String())
+		}
+		defer func() {
+			cmd = exec.Command("rm", "-f", "cluster-dump.tar.gz")
+			if err := cmd.Run(); err != nil {
+				t.Errorf("error cleaning up test data: %s", err.Error())
+			}
+		}()
+		out, err := exec.Command(testcmd[0], testcmd[1:]...).Output()
+		if err != nil {
+			t.Errorf("test %s, error running command %s:\n%s\n\nCommand output:\n%s", test.name, testcmd, err.Error(), out)
+		}
+		if strings.TrimRight(bytes.NewBuffer(out).String(), "\n") != test.want {
+			t.Errorf("test %s, output is not as expected\nOutput: %s\nWanted: %s", test.name, out, test.want)
+		}
+	}
+}
+
 /*
 Option --version
 */

t/pt-config-diff/long_vars.t

@@ -0,0 +1,117 @@
+#!/usr/bin/env perl
+
+BEGIN {
+   die "The PERCONA_TOOLKIT_BRANCH environment variable is not set.\n"
+      unless $ENV{PERCONA_TOOLKIT_BRANCH} && -d $ENV{PERCONA_TOOLKIT_BRANCH};
+   unshift @INC, "$ENV{PERCONA_TOOLKIT_BRANCH}/lib";
+};
+
+use strict;
+use warnings FATAL => 'all';
+use English qw(-no_match_vars);
+use Test::More;
+
+use PerconaTest;
+use Sandbox;
+require "$trunk/bin/pt-config-diff";
+
+require VersionParser;
+my $dp   = new DSNParser(opts=>$dsn_opts);
+my $sb   = new Sandbox(basedir => '/tmp', DSNParser => $dp);
+my $dbh  = $sb->get_dbh_for('source');
+
+my ($ver, $reset, $set_short, $set_long);
+
+if ( !$dbh ) {
+   plan skip_all => 'Cannot connect to sandbox source';
+}
+
+if ( $sandbox_version ge '5.7' ) {
+   $reset = q{SET GLOBAL session_track_system_variables = ''};
+   $set_short =
+      q{SET GLOBAL session_track_system_variables = '}.
+      q{activate_all_roles_on_login,admin_address,}.
+      q{admin_port,admin_ssl_ca,admin_ssl_capath,admin_ssl_cert,}.
+      q{admin_ssl_cipher,admin_ssl_crl,admin_ssl_crlpath,admin_ssl_key,}.
+      q{admin_tls_ciphersuites,admin_tls_version,authentication_policy,}.
+      q{auto_generate_certs,auto_increment_increment,}.
+      q{auto_increment_offset,autocommit,automatic_sp_privileges,}.
+      q{back_log,basedir,big_tables,bind_address,binlog_cache_size,}.
+      q{binlog_checksum,binlog_ddl_skip_rewrite,}.
+      q{binlog_direct_non_transactional_updates,binlog_encryption,}.
+      q{binlog_error_action,binlog_expire_logs_auto_purge,}.
+      q{binlog_expire_logs_seconds,binlog_format,binlog_group_commit_sync_delay,}.
+      q{binlog_group_commit_sync_no_delay_count,binlog_gtid_simple_recovery,}.
+      q{binlog_max_flush_queue_time,binlog_order_commits,}.
+      q{binlog_rotate_encryption_master_key_at_startup,binlog_row_event_max_size,}.
+      q{binlog_row_image,binlog_row_metadata,binlog_row_value_options,}.
+      q{binlog_rows_query_log_events,binlog_skip_flush_commands,}.
+      q{binlog_space_limit,binlog_stmt_cache_size'};
+   $set_long =
+      q{SET GLOBAL session_track_system_variables = '}.
+      q{activate_all_roles_on_login,admin_address,}.
+      q{admin_port,admin_ssl_ca,admin_ssl_capath,admin_ssl_cert,}.
+      q{admin_ssl_cipher,admin_ssl_crl,admin_ssl_crlpath,admin_ssl_key,}.
+      q{admin_tls_ciphersuites,admin_tls_version,authentication_policy,}.
+      q{auto_generate_certs,auto_increment_increment,}.
+      q{auto_increment_offset,autocommit,automatic_sp_privileges,}.
+      q{back_log,basedir,big_tables,bind_address,binlog_cache_size,}.
+      q{binlog_checksum,binlog_ddl_skip_rewrite,}.
+      q{binlog_direct_non_transactional_updates,binlog_encryption,}.
+      q{binlog_error_action,binlog_expire_logs_auto_purge,}.
+      q{binlog_expire_logs_seconds,binlog_format,binlog_group_commit_sync_delay,}.
+      q{binlog_group_commit_sync_no_delay_count,binlog_gtid_simple_recovery,}.
+      q{binlog_max_flush_queue_time,binlog_order_commits,}.
+      q{binlog_rotate_encryption_master_key_at_startup,binlog_row_event_max_size,}.
+      q{binlog_row_image,binlog_row_metadata,binlog_row_value_options,}.
+      q{binlog_rows_query_log_events,binlog_skip_flush_commands,}.
+      q{binlog_space_limit,binlog_stmt_cache_size,}.
+      q{binlog_transaction_compression,binlog_transaction_compression_level_zstd'};
+}
+else {
+   plan skip_all => "Requires MySQL 5.7 or newer";
+}
+
+my $output;
+my $retval;
+
+$sb->do_as_root('source', $set_short);
+
+$output = output(
+   sub { $retval = pt_config_diff::main(
+      "${trunk}/t/pt-config-diff/samples/long_vars_1.cnf",
+      'h=127.1,P=12345,u=msandbox,p=msandbox')
+   },
+   stderr => 1,
+);
+
+is(
+   $retval,
+   0,
+   "No diff on variable value up to 1024 bytes long"
+);
+
+$sb->do_as_root('source', $set_long);
+
+$output = output(
+   sub { $retval = pt_config_diff::main(
+      "${trunk}/t/pt-config-diff/samples/long_vars_2.cnf",
+      'h=127.1,P=12345,u=msandbox,p=msandbox')
+   },
+   stderr => 1,
+);
+
+is(
+   $retval,
+   0,
+   "No diff on variable value longer than 1024 bytes"
+);
+
+# #############################################################################
+# Done.
+# #############################################################################
+$sb->do_as_root('source', $reset);
+
+$sb->wipe_clean($dbh);
+ok($sb->ok(), "Sandbox servers") or BAIL_OUT(__FILE__ . " broke the sandbox");
+done_testing;

t/pt-config-diff/samples/long_vars_1.cnf

@@ -0,0 +1,2 @@
+[mysqld]
+session_track_system_variables = 'activate_all_roles_on_login,admin_address,admin_port,admin_ssl_ca,admin_ssl_capath,admin_ssl_cert,admin_ssl_cipher,admin_ssl_crl,admin_ssl_crlpath,admin_ssl_key,admin_tls_ciphersuites,admin_tls_version,authentication_policy,auto_generate_certs,auto_increment_increment,auto_increment_offset,autocommit,automatic_sp_privileges,back_log,basedir,big_tables,bind_address,binlog_cache_size,binlog_checksum,binlog_ddl_skip_rewrite,binlog_direct_non_transactional_updates,binlog_encryption,binlog_error_action,binlog_expire_logs_auto_purge,binlog_expire_logs_seconds,binlog_format,binlog_group_commit_sync_delay,binlog_group_commit_sync_no_delay_count,binlog_gtid_simple_recovery,binlog_max_flush_queue_time,binlog_order_commits,binlog_rotate_encryption_master_key_at_startup,binlog_row_event_max_size,binlog_row_image,binlog_row_metadata,binlog_row_value_options,binlog_rows_query_log_events,binlog_skip_flush_commands,binlog_space_limit,binlog_stmt_cache_size'

t/pt-config-diff/samples/long_vars_2.cnf

@@ -0,0 +1,2 @@
+[mysqld]
+session_track_system_variables = 'activate_all_roles_on_login,admin_address,admin_port,admin_ssl_ca,admin_ssl_capath,admin_ssl_cert,admin_ssl_cipher,admin_ssl_crl,admin_ssl_crlpath,admin_ssl_key,admin_tls_ciphersuites,admin_tls_version,authentication_policy,auto_generate_certs,auto_increment_increment,auto_increment_offset,autocommit,automatic_sp_privileges,back_log,basedir,big_tables,bind_address,binlog_cache_size,binlog_checksum,binlog_ddl_skip_rewrite,binlog_direct_non_transactional_updates,binlog_encryption,binlog_error_action,binlog_expire_logs_auto_purge,binlog_expire_logs_seconds,binlog_format,binlog_group_commit_sync_delay,binlog_group_commit_sync_no_delay_count,binlog_gtid_simple_recovery,binlog_max_flush_queue_time,binlog_order_commits,binlog_rotate_encryption_master_key_at_startup,binlog_row_event_max_size,binlog_row_image,binlog_row_metadata,binlog_row_value_options,binlog_rows_query_log_events,binlog_skip_flush_commands,binlog_space_limit,binlog_stmt_cache_size,binlog_transaction_compression,binlog_transaction_compression_level_zstd'

t/pt-query-digest/version_check.t

@@ -17,12 +17,6 @@ use PerconaTest;
 use Sandbox;
 require "$trunk/bin/pt-query-digest";
 
-ok (1,
-    "version checking site offline for now"
- );
-done_testing;
-exit 0;
-
 my $output;
 my $cmd = "$trunk/bin/pt-query-digest --limit 1 $trunk/t/lib/samples/slowlogs/slow001.txt";
 
@@ -49,7 +43,7 @@ ok(
 
 like(
    $output,
-   qr/# Query 1: 0 QPS, 0x concurrency, ID 0x7F7D57ACDD8A346E at byte 0/,
+   qr/# Query 1: 0 QPS, 0x concurrency, ID 0xA853B50CDEB4866B3A99CC42AEDCCFCD at byte 359/,
    "Tool ran after version-check"
 ) or diag(Dumper($output));
 
@@ -172,6 +166,23 @@ ok(
 
 unlink "/tmp/pt-query-digest.$PID" if "/tmp/pt-query-digest.$PID";
 
+# #############################################################################
+# # PT-2129 - tools fail on non-readable version check file
+# #############################################################################
+
+system("touch $vc_file");
+chmod 0000, $vc_file;
+
+$output = `$cmd --version-check 2>&1`;
+
+unlike(
+   $output,
+   qr/Can't use an undefined value as an ARRAY reference/,
+   'No undefined value error'
+) or diag($output);
+
+chmod 0664, $vc_file;
+
 # #############################################################################
 # Done.
 # #############################################################################

t/pt-table-checksum/bugs.t

@@ -378,6 +378,29 @@ is(
 diag(`/tmp/12346/stop >/dev/null`); 
 diag(`/tmp/12346/start >/dev/null`); 
 
+# #############################################################################
+# typo in pt-table-checksum error message
+# https://perconadev.atlassian.net/browse/PT-2424
+# #############################################################################
+
+$output = output(sub {
+   pt_table_checksum::main($source_dsn,
+      qw(--no-empty-replicate-table --truncate-replicate-table)
+   )},
+   stderr => 1,
+);
+
+unlike(
+   $output,
+   qr/--resume and --no-empty-replicate-table are mutually exclusive/,
+   "PT-2424: no typo in the error message"
+);
+
+like(
+   $output,
+   qr/--truncate-replicate-table and --no-empty-replicate-table are mutually exclusive/,
+   "PT-2424: correct error message"
+);
 
 #
 # #############################################################################